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LanDroid
Prince
Joined: 11 Jun 2002
Posts: 4476
Location: Cincinnati, OH U.S.
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 Posted: Sun Nov 30, 2014 11:53 am Post subject: CPU Potm Dec. '14 => Similarity Matrix of Proteins |
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After a close vote, Simap is our Project of the Month for December 2014. Simap became a sentimental favorite since it is ending at the end of this year, our final sendoff for some very interesting research.
| Quote: | SIMAP is a database of protein similarities and protein domains. It contains about all currently published protein sequences and is continuously updated. ... SIMAP is to our knowledge the only project that combines comprehensive coverage with respect to all known proteins and incremental update capabilities.
Because of the huge amount of known protein sequences in public databases it became clear that most of them will not be experimentally characterized in the near future. Nevertheless, proteins that have evolved from a common ancestor often share same functions (so-called orthologs). So it is possible to infer the function of a non-characterized protein from an ortholog with known function.
More info: http://boincsimap.org/boincsimap/project.php
Attach here: http://boincsimap.org/boincsimap/
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Tasks ready to send 35,850.
Tasks in progress 494,850.
All servers running.
Starting stats:
28th Place
27,112,870. Total points
50,398. average daily production past week
44,716. RAC 20th place |
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LanDroid
Prince
Joined: 11 Jun 2002
Posts: 4476
Location: Cincinnati, OH U.S.
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| Posted: Sun Nov 30, 2014 12:19 pm Post subject: Back Up PotM |
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Simap has been known to issue large numbers of WUs at the beginning of the month, but have them all enshrubulated by mid-month. In the event that happens again, our back up project will be the 2nd place project known as The CERN Triple, which may be renamed after Sir Ivanst, the loonie who thunked it up.
The Sir Ivanst/CERN Triple consists of three projects related to the Large Hadron Collider at CERN. To participate, shrub any one or all three in any combination.
Sixtrack/LHC@Home
Atlas@Home
Virtual LHC@Home/Formerly Test4Theory
The last two require Oracle VirtualBox to run. However that is basically transparent: install VM software, then attach to the project, no additional settings required. |
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Plomos
Prince
Joined: 26 Apr 2011
Posts: 859
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LanDroid
Prince
Joined: 11 Jun 2002
Posts: 4476
Location: Cincinnati, OH U.S.
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| Posted: Thu Dec 04, 2014 4:01 am Post subject: |
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| Quote: | | Simap: Tasks ready to send 13 |
Uh-ohhhh!
About 25 Knights shrubbed Simap in the past week including 110K points yesterday. If the WUs hold up, that's double production.
Milestones:
DoW 4,000,000
Plomos 8,000
williamd007 3,000 |
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LanDroid
Prince
Joined: 11 Jun 2002
Posts: 4476
Location: Cincinnati, OH U.S.
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| Posted: Sat Dec 06, 2014 11:08 am Post subject: |
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| Quote: | Tasks ready to send 103 
Tasks in progress 602,256 |
Think I saw about 50K WUs yesterday. Do they issue only 24 hours worth at a time? Seems like they are flowing, but may need a 2 day cache to stay ahead if it? KWSN daily production has been over 100K the last two days, double the rate at beginning of the month.
Only 3 1/2 weeks of shrubbing left until Simap closes forever...
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LanDroid
Prince
Joined: 11 Jun 2002
Posts: 4476
Location: Cincinnati, OH U.S.
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| Posted: Fri Dec 12, 2014 6:51 am Post subject: |
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| Quote: | Tasks ready to send 1
Tasks in progress 918,239 |
Despite that, the WUs seem to be flowing well enough?
Milestones:
DoW 4,500,000
Yankton 2,500,000
Gemjunkie[TeaM] 1,100,000
Hal9000x86 400,000
Sir LanDroid [KWSN] 150,000
williamd007 50,000
Sir Mifun Fat in a Right Place 40,000
Plomos 9,000
David 1,000 |
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Yankton
Prince
Joined: 27 Sep 2008
Posts: 1702
Location: California
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| Posted: Fri Dec 12, 2014 6:52 am Post subject: |
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Simap is officially dead. Early this month they marked themselves expecting to be out of work on the 15th. I think that got sped up. Finish what you have and start decimating another project!
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Some days are worse than others. |
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Pooh Bear 27
Prince
Joined: 28 Jan 2005
Posts: 1358
Location: Fond du Lac, WI
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| Posted: Fri Dec 12, 2014 9:41 am Post subject: |
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On the 18th PrimeGrid has their Solstice challenge. PPS Sieve, so even your GPU can have fun. Since SIMAP is all but done, let's rock this challenge and get high marks.
Just an idea. Do what you will.
Reminder, PrimeGrid does not allow you to stock up work before a challenge. Work issued after start time and returned before end time are the only ones counted.
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Watch the movie about me The 4-1-4s: The Original Teenage Hackers (It is only about 12 minutes long.)
My lucky numbers are 121*2^4553899-1 and 3756801695685*2^666669±1
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PhastPhred
Prince
Joined: 22 Mar 2006
Posts: 6017
Location: Northwest AR (USA)
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| Posted: Fri Dec 12, 2014 5:25 pm Post subject: |
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Tasks ready to send 0
Tasks in progress 729,803
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LanDroid
Prince
Joined: 11 Jun 2002
Posts: 4476
Location: Cincinnati, OH U.S.
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| Posted: Fri Dec 12, 2014 9:58 pm Post subject: |
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Don't forget the official back up project: The CERN Triple. See 2nd post in this thread, worth some experimentation...
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Blurf
Prince
Joined: 03 Jan 2011
Posts: 1090
Location: Upstate NY
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| Posted: Sat Dec 13, 2014 1:41 am Post subject: |
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Sixtrack/LHC@Home has no work.....I don't dare install any VM software on this machine for fear it'll crash....
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LanDroid
Prince
Joined: 11 Jun 2002
Posts: 4476
Location: Cincinnati, OH U.S.
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| Posted: Sat Dec 20, 2014 8:40 am Post subject: |
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Simap points are still barely trickling in, down to 2K yesterday, but we'll go ahead and publish this:
Truly Final Simap Statistics R.I.P.
28th Place +/- 0
Total points 28,770,395. +1,657,525.
15th Place Formula Boinc
Final Milestones:
Gemjunkie[TeaM] 1,100,000
williamd007 70,000
Sir Mifun Fat in a Right Place 50,000
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