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GPU PotM March '13 => Collatz AND Poem
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LanDroid
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Joined: 11 Jun 2002
Posts: 4466
Location: Cincinnati, OH U.S.

PostPosted: Fri Mar 01, 2013 6:33 am    Post subject: GPU PotM March '13 => Collatz AND Poem Reply with quote

Due to a relentless tie between Collatz Conjecture and Poem, KWSN will shrub both projects this month.

Protein Optimization with Energy Methods
By joining this project you will contribute to a computational approach to:
- predict the biologically active structure of proteins
- understand the signal-processing mechanisms when the proteins interact with one another
- understand diseases related to protein malfunction or aggregation
- develop new drugs on the basis of the three-dimensions structure of biologically important proteins.
- simulate miscellaneous nanoscale systems, which are of importance for current biological or physical research
http://boinc.fzk.de/poem/

Collatz Conjecture
Collatz Conjecture is a research project that uses Internet-connected computers to do research in mathematics, specifically testing the Collatz Conjecture also known as 3x+1 or HOTPO (half or triple plus one). It can run on an nVidia GPU, ATI GPU, or CPU.
http://boinc.thesonntags.com/collatz/
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LanDroid
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PostPosted: Fri Mar 01, 2013 6:41 am    Post subject: Reply with quote

Starting stats P.O.E.M.
31st Place
239,448,532 total points
243,638. average daily production past week
551,502 RAC 32nd place
24th Place Formula Boinc

Tasks ready to send 68,163

Milestones:
Joe Bloggs passed 300,000
Michelle passes 20,000
Colleen passed 3,000

Starting stats Collatz
20th Place
1,145,595,349 Total points
1,477,176. average daily production past week
1,464,753 RAC 16th place
17th place Formula Boinc

Results ready to send (Collatz) 500
Results ready to send (Mini Collatz) 500

Milestones:
Williamd007 passed 13,000,000
Joe Bloggs passed 950,000
Michelle passed 40,000
thex656 passes 6,000
Sam Bickley passed 500
thex656 passed 5,000
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Joe Bloggs
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PostPosted: Fri Mar 01, 2013 8:12 am    Post subject: Reply with quote

So this is the "keep doing what I've been doing all the time" month? Razz

I've been shrubbing these even before I joined KWSN #ni-1
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LanDroid
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PostPosted: Sat Mar 02, 2013 10:38 am    Post subject: Reply with quote

Those are some great numbers Sir Bloggs, glad we could accommodate you this month!

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PhastPhred
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PostPosted: Sat Mar 02, 2013 3:14 pm    Post subject: Reply with quote

I read somewhere Lady Colleen needed help making POEM work on her Intel SomethingOrAnother GPU -
BOINC only lined up CPU POEMS, not GPU - I don't know what .XML file(s) she needs to edit...
I'll Tag-Team to somebody that may be able to help her out there...

Asus K55a Laptop, 6GB RAM, Intel i5-3210M (2-Core@2-Threads each), 2.5GHz, Intel HD 4000 Graphics,
(OpenCL works on it, but I don't what to tell her how to DO it, to implement it, or what else she may need),
Win8 64-Bit, System is almost new, like a few Months old...

I suggested to Download the Intel 64-Bit Driver, v9.17.10.2932 and see if THAT made BOINC do GPU work

#ni-2
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PostPosted: Sat Mar 02, 2013 4:14 pm    Post subject: Reply with quote

Damn, I never got to vote. I was saving it for another tie Razz
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LanDroid
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PostPosted: Sun Mar 03, 2013 7:20 am    Post subject: Reply with quote

Lady Colleen should also try updating the Boinc client to the latest test version, currently 7.0.52. During the install make sure you do NOT select a certain option that disables GPU's, don't recall exactly what that is something to do with running under reduced privileges?
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[KWSN] Colleen
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PostPosted: Sun Mar 03, 2013 4:13 pm    Post subject: Reply with quote

LanDroid wrote:
Lady Colleen should also try updating the Boinc client to the latest test version, currently 7.0.52. During the install make sure you do NOT select a certain option that disables GPU's, don't recall exactly what that is something to do with running under reduced privileges?


BOINC is already 7.0.52, and I see where the GPU specifically can be turned off, under Activity, and that is 'Use GPU Always', of course!

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Gemjunkie
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PostPosted: Sun Mar 03, 2013 4:46 pm    Post subject: Reply with quote

What does your BOINC manager's log report on startup? e.g.,
Quote:
2/13/2013 11:02:44 PM | | Starting BOINC client version 7.0.28 for windows_x86_64
2/13/2013 11:02:44 PM | | log flags: file_xfer, sched_ops, task
2/13/2013 11:02:44 PM | | Libraries: libcurl/7.25.0 OpenSSL/1.0.1 zlib/1.2.6
2/13/2013 11:02:44 PM | | Data directory: C:\ProgramData\BOINC
2/13/2013 11:02:44 PM | | Running under account Philip
2/13/2013 11:02:44 PM | | Processor: 6 AuthenticAMD AMD Phenom(tm) II X6 1090T Processor [Family 16 Model 10 Stepping 0]
2/13/2013 11:02:44 PM | | Processor: 512.00 KB cache
2/13/2013 11:02:44 PM | | Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 htt pni cx16 syscall nx lm svm sse4a osvw ibs skinit wdt page1gb rdtscp 3dnowext 3dnow
2/13/2013 11:02:44 PM | | OS: Microsoft Windows 7: Home Premium x64 Edition, (06.01.7600.00)
2/13/2013 11:02:44 PM | | Memory: 8.00 GB physical, 15.99 GB virtual
2/13/2013 11:02:44 PM | | Disk: 195.31 GB total, 147.23 GB free
2/13/2013 11:02:44 PM | | Local time is UTC -5 hours
2/13/2013 11:02:44 PM | | ATI GPU 0: Cypress (CAL version 1.4.1741, 1024MB, 991MB available, 5440 GFLOPS peak)
2/13/2013 11:02:44 PM | | OpenCL: ATI GPU 0: Cypress (driver version 1084.2 (VM), device version OpenCL 1.2 AMD-APP (1084.2), 1024MB, 991MB available)

2/13/2013 11:02:44 PM | Poem@Home | Found app_info.xml; using anonymous platform
2/13/2013 11:02:44 PM | fightmalaria@home | Found app_info.xml; using anonymous platform
2/13/2013 11:02:44 PM | OProject@Home | Found app_info.xml; using anonymous platform
2/13/2013 11:02:44 PM | | Config: simulate 6 CPUs
2/13/2013 11:02:44 PM | | Config: report completed tasks immediately
2/13/2013 11:02:44 PM | ABC@home | URL http://abcathome.com/; Computer ID 152736; resource share 100
2/13/2013 11:02:44 PM | Constellation | URL http://aerospaceresearch.net/constellation/; Computer ID 2849; resource share 100
2/13/2013 11:02:44 PM | AQUA@home | URL http://aqua.dwavesys.com/; Computer ID 82918; resource share 100
2/13/2013 11:02:44 PM | Asteroids@home | URL http://asteroidsathome.net/boinc/; Computer ID 703; resource share 100

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PhastPhred
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PostPosted: Sun Mar 03, 2013 6:09 pm    Post subject: Reply with quote

Gemjunkie wrote:
What does your BOINC manager's log report on startup? e.g.,
Quote:
2/13/2013 11:02:44 PM | | Starting BOINC client version 7.0.28 for windows_x86_64
2/13/2013 11:02:44 PM | | log flags: file_xfer, sched_ops, task
2/13/2013 11:02:44 PM | | Libraries: libcurl/7.25.0 OpenSSL/1.0.1 zlib/1.2.6
2/13/2013 11:02:44 PM | | Data directory: C:\ProgramData\BOINC
2/13/2013 11:02:44 PM | | Running under account Philip
2/13/2013 11:02:44 PM | | Processor: 6 AuthenticAMD AMD Phenom(tm) II X6 1090T Processor [Family 16 Model 10 Stepping 0]
2/13/2013 11:02:44 PM | | Processor: 512.00 KB cache
2/13/2013 11:02:44 PM | | Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 htt pni cx16 syscall nx lm svm sse4a osvw ibs skinit wdt page1gb rdtscp 3dnowext 3dnow
2/13/2013 11:02:44 PM | | OS: Microsoft Windows 7: Home Premium x64 Edition, (06.01.7600.00)
2/13/2013 11:02:44 PM | | Memory: 8.00 GB physical, 15.99 GB virtual
2/13/2013 11:02:44 PM | | Disk: 195.31 GB total, 147.23 GB free
2/13/2013 11:02:44 PM | | Local time is UTC -5 hours
2/13/2013 11:02:44 PM | | ATI GPU 0: Cypress (CAL version 1.4.1741, 1024MB, 991MB available, 5440 GFLOPS peak)
2/13/2013 11:02:44 PM | | OpenCL: ATI GPU 0: Cypress (driver version 1084.2 (VM), device version OpenCL 1.2 AMD-APP (1084.2), 1024MB, 991MB available)

2/13/2013 11:02:44 PM | Poem@Home | Found app_info.xml; using anonymous platform
2/13/2013 11:02:44 PM | fightmalaria@home | Found app_info.xml; using anonymous platform
2/13/2013 11:02:44 PM | OProject@Home | Found app_info.xml; using anonymous platform
2/13/2013 11:02:44 PM | | Config: simulate 6 CPUs
2/13/2013 11:02:44 PM | | Config: report completed tasks immediately
2/13/2013 11:02:44 PM | ABC@home | URL http://abcathome.com/; Computer ID 152736; resource share 100
2/13/2013 11:02:44 PM | Constellation | URL http://aerospaceresearch.net/constellation/; Computer ID 2849; resource share 100
2/13/2013 11:02:44 PM | AQUA@home | URL http://aqua.dwavesys.com/; Computer ID 82918; resource share 100
2/13/2013 11:02:44 PM | Asteroids@home | URL http://asteroidsathome.net/boinc/; Computer ID 703; resource share 100

Quote:
3/3/2013 3:03:56 PM | | No config file found - using defaults
3/3/2013 3:03:56 PM | | Starting BOINC client version 7.0.52 for windows_x86_64
3/3/2013 3:03:56 PM | | log flags: file_xfer, sched_ops, task
3/3/2013 3:03:56 PM | | Libraries: libcurl/7.25.0 OpenSSL/1.0.1 zlib/1.2.6
3/3/2013 3:03:56 PM | | Data directory: C:\ProgramData\BOINC
3/3/2013 3:03:56 PM | | Running under account Colleen
3/3/2013 3:03:56 PM | | Processor: 4 GenuineIntel Intel(R) Core(TM) i5-3210M CPU @ 2.50GHz [Family 6 Model 58 Stepping 9]
3/3/2013 3:03:56 PM | | Processor: 256.00 KB cache
3/3/2013 3:03:56 PM | | Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss htt tm pni ssse3 cx16 sse4_1 sse4_2 popcnt aes syscall nx lm vmx tm2 pbe
3/3/2013 3:03:56 PM | | OS: Microsoft Windows 8: x64 Edition, (06.02.9200.00)
3/3/2013 3:03:56 PM | | Memory: 5.89 GB physical, 8.26 GB virtual
3/3/2013 3:03:56 PM | | Disk: 279.45 GB total, 196.70 GB free
3/3/2013 3:03:56 PM | | Local time is UTC -8 hours
3/3/2013 3:03:56 PM | | OpenCL: Intel GPU 0: Intel(R) HD Graphics 4000 (driver version 9.17.10.2932, device version OpenCL 1.1, 1624MB, 1624MB available, 45 GFLOPS peak)
3/3/2013 3:03:56 PM | Poem@Home | URL http://boinc.fzk.de/poem/; Computer ID 156932; resource share 100
3/3/2013 3:03:56 PM | fightmalaria@home | URL http://boinc.ucd.ie/fmah/; Computer ID 11409; resource share 100
3/3/2013 3:03:56 PM | climateprediction.net | URL http://climateprediction.net/; Computer ID 1259804; resource share 100
3/3/2013 3:03:56 PM | MindModeling@Beta | URL http://mindmodeling.org/; Computer ID 30733; resource share 100
3/3/2013 3:03:56 PM | WUProp@Home | URL http://wuprop.boinc-af.org/; Computer ID 48177; resource share 100
3/3/2013 3:03:56 PM | DistributedDataMining | URL http://www.distributeddatamining.org/DistributedDataMining/; Computer ID 11757; resource share 100
3/3/2013 3:03:56 PM | FreeHAL@home | URL http://www.freehal.net/freehal_at_home/; Computer ID 91992; resource share 100
3/3/2013 3:03:56 PM | World Community Grid | URL http://www.worldcommunitygrid.org/; Computer ID 2256521; resource share 100
3/3/2013 3:03:56 PM | World Community Grid | General prefs: from World Community Grid (last modified 22-Dec-2012 11:54:25)
3/3/2013 3:03:56 PM | World Community Grid | Computer location: home
3/3/2013 3:03:56 PM | | General prefs: using separate prefs for home
3/3/2013 3:03:56 PM | | Reading preferences override file
3/3/2013 3:03:56 PM | | Preferences:
3/3/2013 3:03:56 PM | | max memory usage when active: 3617.81MB
3/3/2013 3:03:56 PM | | max memory usage when idle: 5426.71MB
3/3/2013 3:03:56 PM | | max disk usage: 100.00GB
3/3/2013 3:03:56 PM | | suspend work if non-BOINC CPU load exceeds 25 %
3/3/2013 3:03:56 PM | | (to change preferences, visit a project web site or select Preferences in the Manager)
3/3/2013 3:03:56 PM | | Not using a proxy
3/3/2013 3:03:57 PM | climateprediction.net | Restarting task hadcm3n_zj7o_1920_40_008254717_3 using hadcm3n version 607 in slot 0
3/3/2013 3:03:57 PM | FreeHAL@home | Restarting task freehal_wu_nci_23035_input-00447-extralarge_0 using freehalapp version 1687 in slot 5
3/3/2013 3:03:57 PM | DistributedDataMining | Restarting task 2395877_SVM_Rand-2003_Par1-5688_Par2-5748_Dim-5_8261_0 using med2 version 136 in slot 2
3/3/2013 3:03:57 PM | DistributedDataMining | Restarting task 2402664_SVM_Rand-2004_Par1-2095_Par2-2155_Dim-5_21932_0 using med2 version 136 in slot 1
3/3/2013 3:03:57 PM | WUProp@Home | Restarting task wu_v3_1361434202_427225_0 using data_collect_v3 version 342 (nci) in slot 4
3/3/2013 3:03:57 PM | DistributedDataMining | Restarting task 2357976_SVM_Rand-2006_Par1-3861_Par2-3960_Dim-10_21891_0 using med2 version 136 in slot 3
3/3/2013 3:03:57 PM | DistributedDataMining | Sending scheduler request: To fetch work.
3/3/2013 3:03:57 PM | DistributedDataMining | Requesting new tasks for intel_gpu
3/3/2013 3:03:58 PM | FreeHAL@home | Computation for task freehal_wu_nci_23035_input-00447-extralarge_0 finished
3/3/2013 3:04:01 PM | FreeHAL@home | Started download of freehal_wu_nci_23035_input-00447-extralarge_0_0
3/3/2013 3:04:03 PM | FreeHAL@home | Finished download of freehal_wu_nci_23035_input-00447-extralarge_0_0
3/3/2013 3:04:06 PM | DistributedDataMining | Scheduler request completed: got 0 new tasks

Thank you for whatever help you can offer!
I can Post some details, but don't know how to help her...
Yours has " app_info.xml"
What does POEM require in that file? And where is it? Any others?
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Gemjunkie
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PostPosted: Sun Mar 03, 2013 8:49 pm    Post subject: Reply with quote

The app_info.xml file will tell the client to shrub more than one WU simultaneously to use more of the GPU's capacity. I usually shrub 3 on a HD5770, 4 on one HD5870, 2 on another HD5870 that's not up to snuff, 2 on a GTX570 (could do 4 but want some cores for DDM).

I'm not familiar with 4000 series, let's get her walking before she runs.

I'll look at Poem site. BRB
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Yankton
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PostPosted: Sun Mar 03, 2013 10:22 pm    Post subject: Reply with quote

Just to get started:

Have her reset the project. No app-info or app-config is needed to get it to run 4000+ series GPUs.

Bear in mind that poem does not always have gpu work available. so look in the event log and see what it says when contacting poem, whether it be an error or simply no work sent.

Get it running in this fashion and then attempt tuning to make it run more efficiently.

I'm working like a mad henchman but I'll try and poke at this later also if it doesn't work or Sir Gemjunkie doesn't get it lined out or the toothfairy doesn't steal the shrubbery.

Wow, I think everything just tasted yellow for a second!

#ni-1
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PhastPhred
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PostPosted: Sun Mar 03, 2013 10:49 pm    Post subject: Reply with quote

Yankton wrote:
Just to get started:

Have her reset the project. No app-info or app-config is needed to get it to run 4000+ series GPUs.

Bear in mind that poem does not always have gpu work available. so look in the event log and see what it says when contacting poem, whether it be an error or simply no work sent.

Get it running in this fashion and then attempt tuning to make it run more efficiently.

I'm working like a mad henchman but I'll try and poke at this later also if it doesn't work or Sir Gemjunkie doesn't get it lined out or the toothfairy doesn't steal the shrubbery.

Wow, I think everything just tasted yellow for a second!

#ni-1


"3/3/2013 7:42:26 PM | Poem@Home | Sending scheduler request: Requested by user.
3/3/2013 7:42:26 PM | Poem@Home | Requesting new tasks for CPU and intel_gpu
3/3/2013 7:42:27 PM | Poem@Home | Scheduler request completed: got 21 new tasks
...
3/3/2013 7:42:33 PM | Poem@Home | Requesting new tasks for intel_gpu
3/3/2013 7:42:34 PM | Poem@Home | Scheduler request completed: got 0 new tasks
...
3/3/2013 7:42:52 PM | Poem@Home | Starting task poempp_anticancer_aurein_1362299628_559179494_0 using poempp version 106 in slot 6
...

I think ya nailed this one Sir Yankton! #ni-2
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Gemjunkie
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PostPosted: Sun Mar 03, 2013 11:14 pm    Post subject: Reply with quote

Try un-checking 'Use CPU' in your account preferences @Poem and manually update the project repeatedly, as soon as it says "Scheduler request completed", hit it again. May take 5-10 min. to get WU's.
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Yankton
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PostPosted: Sun Mar 03, 2013 11:45 pm    Post subject: Reply with quote

I apologize for not catching this at first.

Intel CPU. Yes boinc can detect it finally. No, there are NO projects with an opencl_intel application. At least none that I know of. Poem, Seti and Einstein do not, I stopped looking there.

I saw the 4000 and my mind went ATI.

So, until someone develops an application for intel's onboard gpu, the only boinc it can do is let you look at the manager. I think before the year is out we will see apps that support it, just not yet.

I need to pick up a can of beans to throw in the crock pot with the pork roast I have thawing. Idea
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PostPosted: Mon Mar 04, 2013 12:50 am    Post subject: Reply with quote

Quote:
BOINC does not yet support Intel Sandybridge or later GPUs

http://boinc.berkeley.edu/wiki/GPU_computing
Sad 4000 is Sandy Bridge
Thanks to all - We tried, folks!
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PostPosted: Mon Mar 04, 2013 2:24 am    Post subject: Reply with quote

I missed that too. Embarassed


Have her ditch the laptoy and get a computer. Idea


Won't canned beans be mush by the time a pork roast cooks in a crock-pot? Confused


Could have soaked dried beans in the time it takes to defrost a roast. Idea


Cannellini?
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Yankton
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PostPosted: Mon Mar 04, 2013 7:46 am    Post subject: Reply with quote

That help page is slightly out of date. Boinc itself does now support intel's graphic set (you proved that above). None of the boinc projects have an app for it yet though. Be patient. I doubt they would have added boinc support if none of the projects would make an app for it.

More importantly,

The recipe I was given says to drain the crockpot with with two hours left and add beans and bbq sauce for the last two hours. I was going to use Bush's baked beans. I've never crock potted beans before so I really hope it doesn't turn them into mush. Bigger problem is it's just me eating off this so I'll just be eating at beans at first to avoid having to reheat them again afterwards. #ni-2
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PostPosted: Mon Mar 04, 2013 7:12 pm    Post subject: Reply with quote

Is anyone who wants to run Collatz's optimized apps but isn't need help getting them installed?

http://boinc.thesonntags.com/collatz/power_apps.php
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PostPosted: Tue Mar 05, 2013 10:13 am    Post subject: Reply with quote

how exactly does one manage to tell boinc to use those files sir Yankton?
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